Create rarity and duplication module — create_duplication

Degree of rarity of a plant in cultivation globally and duplication of individuals per species in a collection.

Usage

create_duplication_report(
  enriched_report,
  collection = NULL,
  min_year = 1970,
  join_bigger_than = 4,
  native = "Naturally occurring only",
  extinct = TRUE,
  doubtful_locations = FALSE,
  output_dir = NULL
)

Arguments

enriched_report: The enriched report of a living collection (created in BGsmartR)
collection: The name of the living collection
min_year: The minimum year for analyses over time.
join_bigger_than: When exploring accessions per item, etc the value at which we merge larger values for simplified pie charts. Default is 4.
native: string where 'Naturally occurring only' or 'Introduced only' reduces the locations used to determine native plants.
extinct: Flag (TRUE/FALSE) for whether to include extinct geographic locations.
doubtful_locations: Flag (TRUE/FALSE) for whether to include doubtful locations.
output_dir: The output directory